debug.h File Reference

This file controls debug facilities. More...

#include "config.h"

Include dependency graph for debug.h:

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Defines
#define	realloc(v, s)   __realloc((v),(s), "no line info", 0)
#define	malloc(s)   __malloc((s), "no line info", 0)
#define	free(v)   __free((v),"no line info", 0)
#define	COMM_TRACE(cmd)   { cmd; }
#define	EVENT_TRACE(cmd)   { cmd; }
#define	PART_TRACE(cmd)   { cmd; }
#define	INTEG_TRACE(cmd)   { cmd; }
#define	CELL_TRACE(cmd)   { cmd; }
#define	GHOST_TRACE(cmd)   { cmd; }
#define	HALO_TRACE(cmd)   { cmd; }
#define	GRID_TRACE(cmd)   { cmd; }
#define	LATTICE_TRACE(cmd)   { cmd; }
#define	FORCE_TRACE(cmd)   { cmd; }
#define	VERLET_TRACE(cmd)   { cmd; }
#define	P3M_TRACE(cmd)   { cmd; }
#define	MDLC_TRACE(cmd)
#define	MAGGS_TRACE(cmd)   { cmd; }
#define	FFT_TRACE(cmd)   { cmd; }
#define	RANDOM_TRACE(cmd)   { cmd; }
#define	THERMO_TRACE(cmd)   { cmd; }
#define	LJ_TRACE(cmd)   { cmd; }
#define	MORSE_TRACE(cmd)   { cmd; }
#define	BUCK_TRACE(cmd)
#define	ESR_TRACE(cmd)   { cmd; }
#define	ESK_TRACE(cmd)   { cmd; }
#define	FENE_TRACE(cmd)   { cmd; }
#define	GHOST_FORCE_TRACE(cmd)   { cmd; }
#define	ONEPART_TRACE(cmd)   { cmd; }
#define	STAT_TRACE(cmd)   { cmd; }
#define	POLY_TRACE(cmd)   { cmd; }
#define	MOLFORCES_TRACE(cmd)   { cmd; }
#define	PTENSOR_TRACE(cmd)   { cmd; }
#define	LB_TRACE(cmd)   { cmd; }
#define	NANCHECK(expr)
	Equals { cmd } iff LB_DEBUG is set.
Functions
void *	__realloc (void *old, unsigned int size, char *where, int line)
	memory allocation test routine
void *	__malloc (unsigned int size, char *where, int line)
	memory allocation test routine
void	__free (void *p, char *where, int line)
	memory allocation test routine
void	core ()
	this functions kills the task with SIGSEGV
void	check_particle_consistency ()
	this performs a lot of tests which will very likely detect corruptions of local_particles and the cell structure.
void	check_particles ()
	check the consistency of the cells and particle_node.
void	print_particle_positions ()
	Print all particle positions contained in cells::cells array.
void	print_particle_forces ()
	Print all particle forces contained in cells::cells array.
Variables
int	regular_exit
	by setting this variable to 1, a regular exit is indicated.
int	check_id
	Identity of the particle to check extensively if ONEPART_DEBUG is defined.

---

Detailed Description

This file controls debug facilities.

The implementation is found in debug.c.

For every define there exists a macro that can be used to encapsulate short lines (like printf("...",...);) of code that should be executed iff the respective *_DEBUG macro is defined.

Definition in file debug.h.

---

Define Documentation

#define BUCK_TRACE

(

cmd

)

Definition at line 218 of file debug.h.

Referenced by add_buck_pair_force(), and calc_buck_cap_radii().

#define CELL_TRACE

(

cmd

)

{ cmd; }

Definition at line 116 of file debug.h.

Referenced by calculate_link_cell_energies(), calculate_link_cell_virials(), cells_on_geometry_change(), cells_re_init(), cells_resort_particles(), check_particle_consistency(), check_particles(), dd_append_particles(), dd_create_cell_grid(), dd_exchange_and_sort_particles(), dd_fill_comm_cell_lists(), dd_on_geometry_change(), dd_prepare_comm(), dd_revert_comm_order(), dd_topology_init(), dd_topology_release(), layered_append_particles(), layered_calculate_energies(), layered_calculate_ia(), layered_calculate_ia_iccp3m(), layered_exchange_and_sort_particles(), layered_prepare_comm(), layered_topology_init(), layered_topology_release(), nsq_balance_particles(), nsq_topology_init(), nsq_topology_release(), realloc_cells(), and recalc_maximal_cutoff_nonbonded().

#define COMM_TRACE

(

cmd

)

{ cmd; }

Definition at line 88 of file debug.h.

Referenced by cuda_bcast_global_part_params(), cuda_mpi_get_particles(), cuda_mpi_get_particles_slave(), cuda_mpi_send_forces(), cuda_mpi_send_forces_slave(), mpi_call(), mpi_get_particles(), mpi_get_particles_slave(), mpi_iccp3m_init(), mpi_iccp3m_init_slave(), mpi_iccp3m_iteration(), mpi_iccp3m_iteration_slave(), mpi_integrate(), mpi_integrate_slave(), mpi_loop(), mpi_stop_slave(), and mpi_who_has().

#define ESK_TRACE

(

cmd

)

{ cmd; }

Definition at line 228 of file debug.h.

#define ESR_TRACE

(

cmd

)

{ cmd; }

Definition at line 222 of file debug.h.

Referenced by p3m_add_pair_force().

#define EVENT_TRACE

(

cmd

)

{ cmd; }

Definition at line 95 of file debug.h.

Referenced by on_boxl_change(), on_cell_structure_change(), on_constraint_change(), on_coulomb_change(), on_ghost_flags_change(), on_integration_start(), on_lb_params_change(), on_lb_params_change_gpu(), on_lbboundary_change(), on_observable_calc(), on_parameter_change(), on_particle_change(), on_program_start(), on_resort_particles(), on_short_range_ia_change(), and on_temperature_change().

#define FENE_TRACE

(

cmd

)

{ cmd; }

Definition at line 234 of file debug.h.

Referenced by calc_fene_pair_force().

#define FFT_TRACE

(

cmd

)

{ cmd; }

Definition at line 185 of file debug.h.

Referenced by dfft_init(), dfft_perform_back(), dfft_perform_forw(), fft_find_comm_groups(), fft_init(), fft_perform_back(), and fft_perform_forw().

#define FORCE_TRACE

(

cmd

)

{ cmd; }

Definition at line 151 of file debug.h.

Referenced by add_non_bonded_pair_force(), add_non_bonded_pair_force_iccp3m(), calc_buck_cap_radii(), calc_lj_cap_radii(), calc_ljangle_cap_radii(), calc_ljcos2_cap_radii(), calc_ljgen_cap_radii(), and calc_morse_cap_radii().

#define free

(

v

)

__free((v),"no line info", 0)

Definition at line 41 of file debug.h.

Referenced by __free(), __realloc(), add_mdlc_force_corrections(), analyze_cwvac(), analyze_formfactor(), analyze_formfactor_av(), analyze_push(), analyze_remove(), auto_exclusion(), bilayer_density_profile(), calc_diffusion_profile(), calc_fluctuations(), calc_radial_density_map(), calc_rdf_adress(), calc_rdf_av(), calc_rdf_intermol_av(), calc_surface_term(), cells_re_init(), check_particles(), cluster_free(), cluster_free_volume_grid(), collectBonds(), correlation_print_average1(), crosslinkC(), cuda_mpi_get_particles(), cuda_mpi_get_particles_slave(), cuda_mpi_send_forces(), cuda_mpi_send_forces_slave(), dfft_init(), distribute_tensors(), double_correlation_finalize(), double_correlation_get_data(), dp3m_free_dipoles(), fft_init(), free_comm(), free_particle_lists(), freePartCfg(), gather_runtime_errors(), get_DLC_dipolar(), get_lipid_orients(), halo_free_fieldtype(), halo_push_communication(), handle_collisions(), imd_send_energies(), imd_send_fcoords(), imd_send_mdcomm(), lb_calc_densprof(), lb_calc_velprof(), lb_check_halo_regions(), lb_collect_boundary_forces(), lb_gpu_get_boundary_forces(), lb_init_boundaries(), lb_init_GPU(), lb_lbfluid_load_checkpoint(), lb_lbfluid_print_boundary(), lb_lbfluid_print_velocity(), lb_lbfluid_print_vtk_boundary(), lb_lbfluid_print_vtk_density(), lb_lbfluid_print_vtk_velocity(), lb_lbfluid_save_checkpoint(), lb_release_fluid(), lb_release_gpu(), lbboundary_get_force(), lu_decompose_matrix(), maggs_exit(), magnetic_dipolar_direct_sum_calculations(), make_bond_type_exist(), mindist3(), mindist4(), MMM2D_add_far(), mpi_comm_mol_info(), mpi_gather_runtime_errors(), mpi_get_particles_slave(), mpi_local_stress_tensor_slave(), mpi_send_bond_slave(), MPI_Type_free(), mpi_who_has(), mpi_who_has_slave(), mpifake_sendrecv(), nemd_free(), nsq_balance_particles(), p3m_calc_kspace_stress(), p3m_free(), particle_invalidate_part_node(), polymerC(), realloc_ia_params(), realloc_tf_params(), release_halo_communication(), remove_particle(), set_particle_type(), sortPartCfg(), tclcommand_analyze_fluid_parse_densprof(), tclcommand_analyze_fluid_parse_velprof(), tclcommand_analyze_parse_aggregation(), tclcommand_analyze_parse_bilayer_density_profile(), tclcommand_analyze_parse_bond_dist(), tclcommand_analyze_parse_bond_l(), tclcommand_analyze_parse_configs(), tclcommand_analyze_parse_cwvac(), tclcommand_analyze_parse_density_profile_av(), tclcommand_analyze_parse_diffusion_profile(), tclcommand_analyze_parse_distribution(), tclcommand_analyze_parse_formfactor(), tclcommand_analyze_parse_g_av(), tclcommand_analyze_parse_gyration_tensor(), tclcommand_analyze_parse_holes(), tclcommand_analyze_parse_internal_dist(), tclcommand_analyze_parse_lipid_orient_order(), tclcommand_analyze_parse_local_stress_tensor(), tclcommand_analyze_parse_modes2d(), tclcommand_analyze_parse_radial_density_map(), tclcommand_analyze_parse_rdf(), tclcommand_analyze_parse_rdfchain(), tclcommand_analyze_parse_re(), tclcommand_analyze_parse_rg(), tclcommand_analyze_parse_rh(), tclcommand_analyze_parse_structurefactor(), tclcommand_analyze_parse_vanhove(), tclcommand_bit_random(), tclcommand_blockfile(), tclcommand_iccp3m_parse_double_list(), tclcommand_iccp3m_parse_normals(), tclcommand_imd_parse_pos(), tclcommand_inter_coulomb_parse_mmm1d(), tclcommand_inter_coulomb_parse_p3m_tune(), tclcommand_inter_magnetic_parse_dp3m_tune_params(), tclcommand_metadynamics_parse_distance(), tclcommand_metadynamics_parse_relative_z(), tclcommand_observable_interacts_with(), tclcommand_observable_print(), tclcommand_part_parse_bond(), tclcommand_part_print_bond_partners(), tclcommand_polymer(), tclcommand_print_average_errorbars(), tclcommand_print_correlation_time(), tclcommand_readmd(), tclcommand_t_random(), tclcommand_uwerr(), tclcommand_writemd(), UWerr(), UWerr_f(), uwerr_free_tcl_vector(), UWerr_proj(), uwerr_read_int_vector(), uwerr_read_matrix(), uwerr_read_tcl_double_vector(), vmdsock_create(), and vmdsock_destroy().

#define GHOST_FORCE_TRACE

(

cmd

)

{ cmd; }

Definition at line 240 of file debug.h.

#define GHOST_TRACE

(

cmd

)

{ cmd; }

Definition at line 123 of file debug.h.

Referenced by cell_cell_transfer(), free_comm(), ghost_communicator(), prepare_comm(), prepare_recv_buffer(), prepare_send_buffer(), and put_recv_buffer().

#define GRID_TRACE

(

cmd

)

{ cmd; }

Definition at line 137 of file debug.h.

Referenced by calc_node_neighbors(), grid_changed_box_l(), and grid_changed_n_nodes().

#define HALO_TRACE

(

cmd

)

{ cmd; }

Definition at line 130 of file debug.h.

Referenced by halo_communication(), halo_copy_vector(), halo_dtcopy(), and prepare_halo_communication().

#define INTEG_TRACE

(

cmd

)

{ cmd; }

Definition at line 109 of file debug.h.

Referenced by announce_resort_particles(), convert_initial_torques(), convert_torques_propagate_omega(), ghmc_close(), ghmc_init(), ghmc_mc(), ghmc_momentum_update(), hamiltonian_calc(), integrate_vv(), momentum_flip(), nemd_change_momentum(), nemd_free(), nemd_init(), nemd_store_velocity_profile(), on_integration_start(), propagate_pos(), propagate_vel(), propagate_vel_pos(), rescale_forces(), rescale_forces_propagate_vel(), tclcommand_ghmc(), tclcommand_integrate(), tclcommand_load_state(), tclcommand_nemd(), tclcommand_nemd_parse_and_print_profile(), tclcommand_nemd_parse_and_print_viscosity(), and tclcommand_save_state().

#define LATTICE_TRACE

(

cmd

)

{ cmd; }

Definition at line 144 of file debug.h.

Referenced by init_lattice().

#define LB_TRACE

(

cmd

)

{ cmd; }

Definition at line 279 of file debug.h.

Referenced by lattice_boltzmann_update_gpu(), lb_init(), lb_init_gpu(), lb_realloc_fluid(), lb_realloc_particles_gpu(), lb_reinit_fluid(), lb_reinit_fluid_gpu(), lb_reinit_parameters(), and lb_reinit_parameters_gpu().

#define LJ_TRACE

(

cmd

)

{ cmd; }

Definition at line 204 of file debug.h.

Referenced by add_lj_pair_force(), add_ljangle_pair_force(), add_ljcos2_pair_force(), add_ljcos_pair_force(), and add_ljgen_pair_force().

#define MAGGS_TRACE

(

cmd

)

{ cmd; }

Definition at line 178 of file debug.h.

Referenced by maggs_calc_forces(), maggs_calc_init_e_field(), and maggs_check_intersect_1D().

#define malloc

(

s

)

__malloc((s), "no line info", 0)

Definition at line 40 of file debug.h.

Referenced by __malloc(), add_mdlc_force_corrections(), aggregation(), alloc_doublelist(), alloc_grained_doublelist(), alloc_grained_intlist(), alloc_intlist(), analyze_append(), analyze_configs(), analyze_push(), auto_exclusion(), average_init(), averages_add_empty_average(), bilayer_density_profile(), calc_diffusion_profile(), calc_fluctuations(), calc_radial_density_map(), calc_rdf_adress(), calc_rdf_av(), calc_rdf_intermol_av(), calc_surface_term(), check_particles(), cluster_free_volume_grid(), cluster_init(), collectBonds(), correlation_print_average1(), crosslinkC(), cuda_mpi_get_particles(), cuda_mpi_get_particles_slave(), cuda_mpi_send_forces(), cuda_mpi_send_forces_slave(), dd_prepare_comm(), delete_particle_of_type(), dfft_init(), distribute_tensors(), double_correlation_finalize(), double_correlation_get_data(), double_correlation_init(), double_correlation_print_spherically_averaged_sf(), fft_common_pre_init(), fft_init(), gather_runtime_errors(), get_DLC_dipolar(), get_lipid_orients(), halo_create_field_hvector(), halo_create_field_vector(), halo_create_fieldtype(), halo_push_communication(), imd_send_energies(), imd_send_fcoords(), imd_send_mdcomm(), init_gc(), init_type_array(), layered_prepare_comm(), lb_calc_densprof(), lb_calc_velprof(), lb_check_halo_regions(), lb_collect_boundary_forces(), lb_gpu_get_boundary_forces(), lb_init_boundaries(), lb_init_GPU(), lb_lbfluid_load_checkpoint(), lb_lbfluid_print_boundary(), lb_lbfluid_print_velocity(), lb_lbfluid_print_vtk_boundary(), lb_lbfluid_print_vtk_density(), lb_lbfluid_print_vtk_velocity(), lb_lbfluid_save_checkpoint(), lb_lbnode_get_pi_neq(), lb_lbnode_get_rho(), lb_lbnode_get_u(), lb_pre_init(), lbboundary_get_force(), lu_decompose_matrix(), maggs_setup_local_lattice(), magnetic_dipolar_direct_sum_calculations(), malloc_3d_grid(), mindist3(), mindist4(), MMM2D_add_far(), modes2d(), mpi_bcast_ia_params_slave(), mpi_comm_mol_info(), mpi_gather_runtime_errors(), mpi_get_particles(), mpi_get_particles_slave(), mpi_local_stress_tensor(), mpi_local_stress_tensor_slave(), mpi_send_bond_slave(), MPI_Type_contiguous(), MPI_Type_hvector(), MPI_Type_struct(), MPI_Type_vector(), mpi_who_has(), mpi_who_has_slave(), mpifake_sendrecv(), nemd_init(), nsq_balance_particles(), nsq_prepare_comm(), overlapped_bonded_set_params(), p3m_calc_kspace_stress(), p3m_gpu_init(), parse_corr_operation(), parse_id_list(), polymerC(), prepare_collision_queue(), prepare_comm(), realloc_ia_params(), realloc_tf_params(), remove_particle(), set_particle_type(), sortPartCfg(), strcat_alloc(), tabulated_bonded_set_params(), tclcommand_analyze_fluid_parse_densprof(), tclcommand_analyze_fluid_parse_velprof(), tclcommand_analyze_parse_aggregation(), tclcommand_analyze_parse_bilayer_density_profile(), tclcommand_analyze_parse_configs(), tclcommand_analyze_parse_density_profile_av(), tclcommand_analyze_parse_diffusion_profile(), tclcommand_analyze_parse_distribution(), tclcommand_analyze_parse_get_folded_positions(), tclcommand_analyze_parse_holes(), tclcommand_analyze_parse_lipid_orient_order(), tclcommand_analyze_parse_local_stress_tensor(), tclcommand_analyze_parse_modes2d(), tclcommand_analyze_parse_radial_density_map(), tclcommand_analyze_parse_rdf(), tclcommand_analyze_parse_vanhove(), tclcommand_bit_random(), tclcommand_blockfile(), tclcommand_correlation_parse_corr(), tclcommand_iccp3m_parse_double_list(), tclcommand_imd_parse_pos(), tclcommand_observable_interacts_with(), tclcommand_observable_print(), tclcommand_observable_tclcommand(), tclcommand_parse_profile(), tclcommand_parse_radial_profile(), tclcommand_part_parse_bond(), tclcommand_part_print_bond_partners(), tclcommand_polymer(), tclcommand_print_average_errorbars(), tclcommand_print_correlation_time(), tclcommand_readmd(), tclcommand_t_random(), tclcommand_uwerr(), tclcommand_writemd(), updatePartCfg(), UWerr(), uwerr_create_tcl_vector(), UWerr_f(), uwerr_read_int_vector(), uwerr_read_matrix(), uwerr_read_tcl_double_vector(), vmdsock_accept(), and vmdsock_create().

#define MDLC_TRACE

(

cmd

)

Definition at line 174 of file debug.h.

Referenced by mdlc_set_params(), mdlc_tune(), and tclcommand_inter_magnetic_parse_mdlc_params().

#define MOLFORCES_TRACE

(

cmd

)

{ cmd; }

Definition at line 266 of file debug.h.

#define MORSE_TRACE

(

cmd

)

{ cmd; }

Definition at line 210 of file debug.h.

Referenced by add_morse_pair_force().

#define NANCHECK

(

expr

)

Equals { cmd } iff LB_DEBUG is set.

Definition at line 289 of file debug.h.

#define ONEPART_TRACE

(

cmd

)

{ cmd; }

Definition at line 246 of file debug.h.

Referenced by add_buck_pair_force(), add_dh_coulomb_pair_force(), add_hat_pair_force(), add_interrf_pair_force(), add_lj_pair_force(), add_ljangle_pair_force(), add_ljcos2_pair_force(), add_ljcos_pair_force(), add_ljgen_pair_force(), add_morse_pair_force(), add_rf_coulomb_pair_force_no_cutoff(), add_soft_pair_force(), add_tunable_slip_pair_force(), build_verlet_lists_and_calc_verlet_ia(), build_verlet_lists_and_calc_verlet_ia_iccp3m(), calc_endangledist_pair_force(), calc_fene_pair_force(), calc_harmonic_pair_force(), calc_overlap_bond_force(), calc_particle_lattice_ia(), calc_stretching_force_pair_force(), calc_subt_lj_pair_force(), calc_tab_bond_force(), convert_initial_torques(), convert_torques_propagate_omega(), dp3m_assign_forces_dip(), friction_thermo_langevin(), friction_thermo_langevin_rotation(), lb_viscous_coupling(), P3M_assign_forces(), P3M_assign_torques(), propagate_omega_quat_particle(), propagate_press_box_pos_and_rescale_npt(), propagate_vel(), propagate_vel_pos(), rescale_forces(), and rescale_forces_propagate_vel().

#define P3M_TRACE

(

cmd

)

{ cmd; }

Definition at line 165 of file debug.h.

Referenced by dp3m_adaptive_tune(), dp3m_calc_kspace_forces(), dp3m_compute_constants_energy_dipolar(), dp3m_gather_fft_grid(), dp3m_get_accuracy(), dp3m_init(), dp3m_interpolate_dipole_assignment_function(), dp3m_m_time(), dp3m_mc_time(), dp3m_realloc_ca_fields(), dp3m_spread_force_grid(), p3m_adaptive_tune(), p3m_calc_kspace_forces(), p3m_count_charged_particles(), p3m_gather_fft_grid(), p3m_get_accuracy(), p3m_init(), p3m_interpolate_charge_assignment_function(), p3m_m_time(), p3m_mc_time(), p3m_mcr_time(), p3m_realloc_ca_fields(), and p3m_spread_force_grid().

#define PART_TRACE

(

cmd

)

{ cmd; }

Definition at line 102 of file debug.h.

Referenced by local_place_particle(), realloc_particlelist(), recv_particles(), send_particles(), and tclcommand_part_print_all().

#define POLY_TRACE

(

cmd

)

{ cmd; }

Definition at line 259 of file debug.h.

Referenced by collectBonds(), counterionsC(), crosslinkC(), polymerC(), saltC(), tclcommand_counterions(), tclcommand_crosslink(), tclcommand_diamond(), tclcommand_icosaeder(), tclcommand_maxwell_velocities(), tclcommand_salt(), and tclcommand_velocities().

#define PTENSOR_TRACE

(

cmd

)

{ cmd; }

Definition at line 273 of file debug.h.

Referenced by distribute_tensors(), does_line_go_through_cube(), local_stress_tensor_calc(), mpi_local_stress_tensor(), mpi_local_stress_tensor_slave(), and tclcommand_analyze_parse_local_stress_tensor().

#define RANDOM_TRACE

(

cmd

)

{ cmd; }

Definition at line 192 of file debug.h.

Referenced by init_random_seed(), mpi_bit_random_seed(), mpi_bit_random_seed_slave(), mpi_bit_random_stat(), mpi_bit_random_stat_slave(), mpi_random_seed(), mpi_random_seed_slave(), mpi_random_stat(), mpi_random_stat_slave(), tclcommand_bit_random(), and tclcommand_t_random().

#define realloc	(		v,
			s
	)		__realloc((v),(s), "no line info", 0)

Definition at line 39 of file debug.h.

Referenced by __realloc(), add_pair(), add_pair_iccp3m(), analyze_append(), analyze_configs(), analyze_cwvac(), analyze_formfactor(), analyze_formfactor_av(), analyze_rdfchain(), analyze_remove(), averages_add_empty_average(), bcast_iccp3m_cfg(), calc_bond_dist(), calc_bond_dist_av(), calc_bond_l(), calc_bond_l_av(), calc_g1_av(), calc_g2_av(), calc_g3_av(), calc_gyration_tensor(), calc_internal_dist(), calc_internal_dist_av(), calc_re(), calc_re_av(), calc_rg(), calc_rg_av(), calc_rh(), calc_rh_av(), calc_structurefactor(), collectBonds(), create_mod_psi_up_to(), crosslinkC(), dd_init_cell_interactions(), dd_topology_release(), detect_collision(), dfft_init(), dp3m_calc_differential_operator(), dp3m_calc_influence_function_energy(), dp3m_calc_influence_function_force(), dp3m_calc_meshift(), dp3m_init(), dp3m_interpolate_dipole_assignment_function(), dp3m_realloc_ca_fields(), ELC_on_resort_particles(), fft_init(), free_pairList(), generate_constraint(), generate_lbboundary(), halo_push_communication(), init_g123(), init_type_array(), lb_calc_densprof(), lb_calc_velprof(), lb_init_boundaries(), lb_lbnode_set_extforce_GPU(), lb_prepare_communication(), lb_realloc_fluid(), maggs_calc_forces(), make_bond_type_exist(), MMM2D_on_resort_particles(), mpi_bcast_constraint(), mpi_bcast_constraint_slave(), mpi_bcast_lbboundary(), mpi_bcast_lbboundary_slave(), mpi_gather_runtime_errors(), mpi_gather_runtime_errors_slave(), mpi_who_has(), p3m_calc_differential_operator(), p3m_calc_influence_function_energy(), p3m_calc_influence_function_force(), p3m_calc_meshift(), p3m_init(), p3m_interpolate_charge_assignment_function(), p3m_realloc_ca_fields(), prepare_halo_communication(), prepare_recv_buffer(), prepare_send_buffer(), realloc_cellplist(), realloc_cells(), realloc_doublelist(), realloc_grained_doublelist(), realloc_grained_intlist(), realloc_intlist(), realloc_local_particles(), realloc_particle_node(), realloc_particlelist(), realloc_topology(), reallocate_global_type_list(), reallocate_type_array(), register_global_callback(), resize_verlet_list(), resize_verlet_list_iccp3m(), runtime_error(), strcat_alloc(), tclcommand_correlation_parse_corr(), tclcommand_iccp3m_parse_double_list(), tclcommand_iccp3m_parse_normals(), tclcommand_observable(), and wall_sort_particles().

#define STAT_TRACE

(

cmd

)

{ cmd; }

Definition at line 252 of file debug.h.

Referenced by calc_fluctuations(), map_to_2dgrid(), modes2d(), tclcommand_analyze_parse_bilayer_set(), tclcommand_analyze_parse_get_folded_positions(), tclcommand_analyze_parse_get_lipid_orients(), and tclcommand_analyze_parse_modes2d().

#define THERMO_TRACE

(

cmd

)

{ cmd; }

Definition at line 198 of file debug.h.

Referenced by friction_thermo_langevin(), friction_thermo_langevin_rotation(), tclcommand_ghmc(), tclcommand_thermostat(), thermo_init_dpd(), thermo_init_ghmc(), thermo_init_langevin(), and thermo_init_npt_isotropic().

#define VERLET_TRACE

(

cmd

)

{ cmd; }

Definition at line 158 of file debug.h.

Referenced by build_verlet_lists(), build_verlet_lists_and_calc_verlet_ia(), build_verlet_lists_and_calc_verlet_ia_iccp3m(), calculate_verlet_energies(), and calculate_verlet_virials().

---

Function Documentation

void __free	(	void *	p,
		char *	where,
		int	line
	)

memory allocation test routine

Definition at line 79 of file debug.c.

References free, and this_node.

void* __malloc	(	unsigned int	size,
		char *	where,
		int	line
	)

memory allocation test routine

Definition at line 68 of file debug.c.

References malloc, and this_node.

void* __realloc	(	void *	old,
		unsigned int	size,
		char *	where,
		int	line
	)

memory allocation test routine

Definition at line 54 of file debug.c.

References free, realloc, and this_node.

void check_particle_consistency

(

)

this performs a lot of tests which will very likely detect corruptions of local_particles and the cell structure.

Definition at line 100 of file debug.c.

References box_l, CellPList::cell, CELL_TRACE, errexit(), ghost_cells, ParticleProperties::identity, local_cells, local_particles, max_seen_particle, CellPList::n, ParticleList::n, n_total_particles, ParticlePosition::p, Particle::p, ParticleList::part, PERIODIC, Particle::r, ROUND_ERROR_PREC, and this_node.

Referenced by cells_resort_particles(), dd_exchange_and_sort_particles(), and nsq_balance_particles().

void check_particles

(

)

check the consistency of the cells and particle_node.

Called from mpi_bcast_event(CHECK_PARTICLES)

Definition at line 187 of file debug.c.

References box_l, CellPList::cell, CELL_TRACE, comm_cart, errexit(), free, ParticleProperties::identity, local_cells, local_particles, malloc, max_seen_particle, MPI_Bcast(), MPI_INT, CellPList::n, ParticleList::n, n_total_particles, Particle::p, ParticleList::part, particle_node, PERIODIC, skin, skin2, and this_node.

Referenced by mpi_bcast_event_slave().

void core

(

)

this functions kills the task with SIGSEGV

Definition at line 87 of file debug.c.

References core_done, regular_exit, and this_node.

Referenced by errexit(), mpi_core(), and on_program_start().

void print_particle_forces

(

)

Print all particle forces contained in cells::cells array.

Definition at line 314 of file debug.c.

References cells, ParticleForce::f, Particle::f, ParticleList::n, n_cells, ParticleList::part, and this_node.

void print_particle_positions

(

)

Print all particle positions contained in cells::cells array.

Definition at line 295 of file debug.c.

References cells, ParticleList::n, n_cells, ParticlePosition::p, ParticleList::part, Particle::r, and this_node.

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Variable Documentation

int check_id

Identity of the particle to check extensively if ONEPART_DEBUG is defined.

Definition at line 45 of file debug.c.

Referenced by add_buck_pair_force(), add_dh_coulomb_pair_force(), add_hat_pair_force(), add_interrf_pair_force(), add_lj_pair_force(), add_ljangle_pair_force(), add_ljcos2_pair_force(), add_ljcos_pair_force(), add_ljgen_pair_force(), add_morse_pair_force(), add_rf_coulomb_pair_force_no_cutoff(), add_soft_pair_force(), add_tunable_slip_pair_force(), build_verlet_lists_and_calc_verlet_ia(), build_verlet_lists_and_calc_verlet_ia_iccp3m(), calc_endangledist_pair_force(), calc_fene_pair_force(), calc_harmonic_pair_force(), calc_overlap_bond_force(), calc_particle_lattice_ia(), calc_stretching_force_pair_force(), calc_subt_lj_pair_force(), calc_tab_bond_force(), convert_initial_torques(), convert_torques_propagate_omega(), dp3m_assign_forces_dip(), friction_thermo_langevin(), friction_thermo_langevin_rotation(), lb_viscous_coupling(), P3M_assign_forces(), P3M_assign_torques(), propagate_omega_quat_particle(), propagate_press_box_pos_and_rescale_npt(), propagate_vel(), propagate_vel_pos(), rescale_forces(), and rescale_forces_propagate_vel().

int regular_exit

by setting this variable to 1, a regular exit is indicated.

In that case, no core dump is generated.

Definition at line 38 of file debug.c.

Referenced by core(), mpi_stop(), and mpi_stop_slave().